Query Specific Object Types

Source: R/generics.R, R/seurat.R

List the names of Assay, DimReduc, Graph, Neighbor objects

Assays(object, ...)

Graphs(object, slot = NULL)

Neighbors(object, slot = NULL)

Reductions(object, slot = NULL)

# S3 method for Seurat
Assays(object, slot = deprecated(), ...)

Arguments

object

A Seurat object

...

Ignored

slot

Name of component object to return

Value

If slot is NULL, the names of all component objects in this Seurat object. Otherwise, the specific object specified

Examples

Assays(pbmc_small)
#> [1] "RNA"

Graphs(pbmc_small)
#> [1] "RNA_snn"

Reductions(object = pbmc_small)
#> [1] "pca"  "tsne"